Index: firmware/source/sys_main.c
===================================================================
diff -u -rf267c42c91fd6e22db80e19039b8993582de51e9 -r8638b207699a3a48e3657e838e24ae838369c867
--- firmware/source/sys_main.c	(.../sys_main.c)	(revision f267c42c91fd6e22db80e19039b8993582de51e9)
+++ firmware/source/sys_main.c	(.../sys_main.c)	(revision 8638b207699a3a48e3657e838e24ae838369c867)
@@ -131,11 +131,11 @@
     mibspiInit();   // configure MIBSPI3 and re-purpose MIBSPI1 & 5 pins for GPIO
     etpwmInit();    // configure PWMs
         etpwmSetCmpA( etpwmREG1, 0 );
-        etpwmSetCmpA( etpwmREG2, 0 );
+        etpwmSetCmpB( etpwmREG1, 0 );
+        etpwmSetCmpB( etpwmREG2, 0 );
         etpwmSetCmpA( etpwmREG3, 0 );
-        etpwmSetCmpA( etpwmREG4, 0 );
         etpwmSetCmpA( etpwmREG6, 0 );
-        etpwmSetCmpA( etpwmREG7, 0 );
+        etpwmSetCmpB( etpwmREG6, 0 );
     canInit();      // CAN1 = CAN, re-purposing CAN2 and CAN3 Rx and Tx pins as GPIO
     sciInit();      // SCI1 used for PC serial interface, SCI2 used for FPGA serial interface
     dmaEnable();    // enable DMA