Index: firmware/App/Services/FPGA.c
===================================================================
diff -u -r8e366c26b98be701b93f6d224955fae41b96b0aa -r1145e9197855b4f2cb79eb407d3899059b0ca410
--- firmware/App/Services/FPGA.c	(.../FPGA.c)	(revision 8e366c26b98be701b93f6d224955fae41b96b0aa)
+++ firmware/App/Services/FPGA.c	(.../FPGA.c)	(revision 1145e9197855b4f2cb79eb407d3899059b0ca410)
@@ -320,6 +320,7 @@
 static void consumeUnexpectedData( void );
 static void monitorFPGAPowerStatus( void );
 static BOOL checkFPGACommFailure( void );
+static BOOL checkFPGAFEOEFailure( void );
 
 /*********************************************************************//**
  * @brief
@@ -519,6 +520,9 @@
 {
     fpgaReadByteSize = sizeof( FPGA_SENSORS_T );
 
+    // Check if FE or OE error has occurred
+    checkFPGAFEOEFailure();
+
     // FPGA incoming state machine
     switch ( fpgaState )
     {
@@ -568,6 +572,9 @@
 {
     fpgaReadByteSize = sizeof( FPGA_SENSORS_T );
 
+    // Check if FE or OE error has occurred
+    checkFPGAFEOEFailure();
+
     // FPGA outgoing state machine
     switch ( fpgaState )
     {
@@ -2353,4 +2360,35 @@
 
 }
 
+/*********************************************************************//**
+ * @brief
+ * The checkFPGACommFailure function increments the FPGA comm failure
+ * windowed timer if an FE or OE error has occurred and returns whether
+ * or not the number of failures in
+ * the window have been reached.
+ * @details Inputs: none
+ * @details Outputs: none
+ * @return TRUE if windowed count exceeded, else false.
+ *************************************************************************/
+static BOOL checkFPGAFEOEFailure( void )
+{
+    BOOL status = false;
+    BOOL FPGAFEOEError = getSci2FEOEError();
+
+    if ( TRUE == FPGAFEOEError)
+    {
+        if ( getMSTimerCount() > MIN_POWER_ON_TIME_FOR_COMM_FAILS )
+        {
+            if ( TRUE == incTimeWindowedCount( TIME_WINDOWED_COUNT_FPGA_COMM_FAILURES ) )
+            {
+                SET_ALARM_WITH_2_U32_DATA( ALARM_ID_HD_FPGA_COMM_TIMEOUT, MAX_FPGA_COMM_FAILURES, (U32)fpgaSensorReadings.errorCountProcessor )
+                status = TRUE;
+            }
+        }
+    }
+
+    return status;
+
+}
+
 /**@}*/